Work through TODO fixes

internal/app/app.go

@@ -326,6 +326,15 @@ func Run(ctx context.Context, opts Options) error {
 		}
 	}()
 
+	// Timer sidebar refresher: countdown labels are computed at draw
+	// time, so wake the sidebar when the next visible timer bucket is
+	// due to change even if no child PTY output arrives.
+	wg.Add(1)
+	go func() {
+		defer wg.Done()
+		st.runTimerSidebarRefresher(ctx)
+	}()
+
 	// Marquee ticker: while a focused sidebar row's name overflows the
 	// rail width, advance the pause-scroll-pause animation by marking
 	// the sidebar dirty every marqueeStep. The chrome ticker above does
@@ -671,6 +680,20 @@ func (st *uiState) clearViewportArea() {
 	_, _ = os.Stdout.WriteString(b.String())
 }
 
+func (st *uiState) repaintFocusedWithChrome() {
+	st.mu.Lock()
+	padFocused := st.focusedPad != ""
+	st.mu.Unlock()
+	if padFocused {
+		st.repaintFocusedPad()
+	} else {
+		st.repaintFocused()
+	}
+	st.drawTabBar()
+	st.drawSidebar()
+	st.drawStatusLine()
+}
+
 func (st *uiState) restartFocusedCommand(processID string) {
 	c := st.sess.FindChild(processID)
 	if c == nil || c.Kind != KindCommand {
@@ -687,14 +710,18 @@ func (st *uiState) restartFocusedCommand(processID string) {
 	st.repaintNextPTYBudget = 2
 	st.mu.Unlock()
 
-	st.outMu.Lock()
-	_, _ = os.Stdout.Write(renderer.ClearViewport())
-	st.outMu.Unlock()
+	st.repaintFocusedWithChrome()
 
 	if err := st.sess.Restart(c.ID, syscall.SIGTERM, layout.childCols(), layout.childRows()); err != nil {
 		st.flashError(fmt.Sprintf("restart %s: %v", c.DisplayName(), err))
+		st.drawTabBar()
+		st.drawSidebar()
+		st.drawStatusLine()
 		return
 	}
+	st.outMu.Lock()
+	_, _ = os.Stdout.Write(renderer.ClearViewport())
+	st.outMu.Unlock()
 	st.moveToViewportOrigin()
 	st.drawTabBar()
 	st.drawSidebar()
@@ -741,12 +768,7 @@ func (st *uiState) notifyAttention(childID, reason string) {
 }
 
 func (st *uiState) scratchpadsChanged() {
-	st.padsCacheMu.Lock()
-	st.padsCache = nil
-	st.padsCacheMu.Unlock()
-	st.chromeCacheMu.Lock()
-	st.sidebarCache = ""
-	st.chromeCacheMu.Unlock()
+	st.invalidateScratchpadsCache()
 	st.drawSidebar()
 	st.mu.Lock()
 	focusedPad := st.focusedPad
@@ -756,6 +778,15 @@ func (st *uiState) scratchpadsChanged() {
 	}
 }
 
+func (st *uiState) invalidateScratchpadsCache() {
+	st.padsCacheMu.Lock()
+	st.padsCache = nil
+	st.padsCacheMu.Unlock()
+	st.chromeCacheMu.Lock()
+	st.sidebarCache = ""
+	st.chromeCacheMu.Unlock()
+}
+
 // OnChildSpawned auto-focuses the new child when the spawn came from
 // the user (palette, persistence restore, or an external MCP client with
 // no resolved identity). When ParentID is set — meaning a patterm-managed
@@ -1143,6 +1174,55 @@ func (st *uiState) markSidebarDirty() {
 	}
 }
 
+func (st *uiState) runTimerSidebarRefresher(ctx context.Context) {
+	if st.timers == nil {
+		<-ctx.Done()
+		return
+	}
+	changes := st.timers.changeEvents()
+	var timer *time.Timer
+	var timerC <-chan time.Time
+	stop := func() {
+		if timer == nil {
+			return
+		}
+		if !timer.Stop() {
+			select {
+			case <-timer.C:
+			default:
+			}
+		}
+		timer = nil
+		timerC = nil
+	}
+	arm := func() {
+		stop()
+		wait, ok := st.timers.nextSidebarRefreshAfter(time.Now())
+		if !ok {
+			return
+		}
+		if wait < timerSidebarMinRefresh {
+			wait = timerSidebarMinRefresh
+		}
+		timer = time.NewTimer(wait)
+		timerC = timer.C
+	}
+	defer stop()
+	arm()
+	for {
+		select {
+		case <-ctx.Done():
+			return
+		case <-changes:
+			st.markSidebarDirty()
+			arm()
+		case <-timerC:
+			st.markSidebarDirty()
+			arm()
+		}
+	}
+}
+
 func (st *uiState) invalidateChromeCache() {
 	st.chromeCacheMu.Lock()
 	st.tabBarCache = ""
@@ -1433,9 +1513,10 @@ func (st *uiState) processStdin(chunk []byte) {
 		if st.focusedID != "" {
 			if c := st.sess.FindChild(st.focusedID); c != nil && c.Status() == StatusRunning {
 				prev := c.Owner()
-				// InjectAsUser splits Enter bytes onto their own
-				// writes so claude / codex / opencode don't treat a
-				// "text\r" batch as a paste.
+				// Agent panes split Enter bytes onto their own writes
+				// so claude / codex / opencode don't treat a
+				// "text\r" batch as a paste. Raw terminals keep paste
+				// bytes batched.
 				_ = c.InjectAsUser(forward)
 				if st.summaries != nil {
 					st.summaries.ObserveHumanInput(c.ID, forward)
@@ -2131,20 +2212,47 @@ func (st *uiState) handlePadDelete(name string) {
 		st.repaintFocused()
 		return
 	}
+	st.mu.Lock()
+	wasFocused := st.focusedPad == name
+	st.mu.Unlock()
 	if err := st.pads.Delete(name); err != nil {
 		st.flashError(fmt.Sprintf("delete %s: %v", name, err))
 		return
 	}
-	st.mu.Lock()
-	if st.focusedPad == name {
+	if wasFocused {
+		st.invalidateScratchpadsCache()
+		if entries := st.padsList(); len(entries) > 0 {
+			next := entries[0].Name
+			st.mu.Lock()
+			st.focusedPad = next
+			st.focusedID = ""
+			st.focusedName = next
+			if st.padOffsetName != next {
+				st.padOffset = 0
+				st.padOffsetName = next
+			}
+			st.mu.Unlock()
+			st.repaintFocusedWithChrome()
+			return
+		}
+		if next := firstRunningTopLevel(st.sess.Children()); next != nil {
+			st.focusProcess(next.ID)
+			return
+		}
+		st.mu.Lock()
 		st.focusedPad = ""
+		st.focusedName = ""
+		st.padOffset = 0
+		st.padOffsetName = ""
+		st.mu.Unlock()
+		st.renderEmptyState()
+		st.drawTabBar()
+		st.drawSidebar()
+		st.drawStatusLine()
+		return
 	}
-	st.mu.Unlock()
 	st.scratchpadsChanged()
-	st.repaintFocused()
-	st.drawTabBar()
-	st.drawSidebar()
-	st.drawStatusLine()
+	st.repaintFocusedWithChrome()
 }
 
 func (st *uiState) handlePadRename(oldName, newName string) {
@@ -2293,8 +2401,19 @@ func (st *uiState) handleProcRestart(childID string) {
 		return
 	}
 	layout := st.layoutSnapshot()
+	st.mu.Lock()
+	if c.ID == st.focusedID {
+		st.renderer = newViewportRenderer(layout)
+		st.repaintNextPTY = c.ID
+		st.repaintNextPTYBudget = 2
+	}
+	st.mu.Unlock()
+	st.repaintFocusedWithChrome()
 	if err := st.sess.Restart(childID, syscall.SIGTERM, layout.childCols(), layout.childRows()); err != nil {
 		st.flashError(fmt.Sprintf("restart %s: %v", c.DisplayName(), err))
+		st.drawTabBar()
+		st.drawSidebar()
+		st.drawStatusLine()
 		return
 	}
 	st.repaintFocused()